Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s oxidoreductase | A7Q26_10445 | Not Available | Positive | 2281899 - 2282654 | 26415.8 |
| (fe-s)-binding protein | A7Q26_10450 | Not Available | Positive | 2282651 - 2284045 | 50882.8 |
| hypothetical protein | A7Q26_10455 | Not Available | Positive | 2284042 - 2284656 | 21604.8 |
| succinyl-diaminopimelate desuccinylase | A7Q26_10465 | Not Available | Negative | 2285332 - 2286495 | 40939.0 |
| transcriptional regulator | A7Q26_10470 | Not Available | Positive | 2286553 - 2286996 | 15952.6 |
| ld-carboxypeptidase | A7Q26_10475 | Not Available | Positive | 2287050 - 2288039 | 35014.1 |
| phosphoglycerate mutase | A7Q26_10480 | Not Available | Negative | 2288044 - 2288628 | 20968.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | A7Q26_10485 | Not Available | Negative | 2288634 - 2289443 | 28698.6 |
| d-arabinose 5-phosphate | A7Q26_10490 | Not Available | Negative | 2289440 - 2290450 | 35737.5 |
| protein capi | A7Q26_10495 | Not Available | Negative | 2290742 - 2291743 | 36885.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

