Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan acetylesterase | A7Q26_10345 | Not Available | Positive | 2259108 - 2260313 | 42981.1 |
| exo-poly-alpha-d-galacturonosidase | A7Q26_10350 | Not Available | Positive | 2260324 - 2261835 | 54267.8 |
| l-rhamnose mutarotase | A7Q26_10355 | Not Available | Positive | 2261904 - 2262218 | 12505.0 |
| beta-galactosidase | A7Q26_10360 | Not Available | Positive | 2262229 - 2265237 | 108051.0 |
| glycosyl hydrolase family 88 | A7Q26_10365 | Not Available | Positive | 2265238 - 2266353 | 42433.5 |
| mfs transporter | A7Q26_10370 | Not Available | Positive | 2266438 - 2267961 | 55194.5 |
| esterase | A7Q26_10375 | Not Available | Positive | 2267973 - 2269163 | 41984.2 |
| glycoside hydrolase family 43 | A7Q26_10380 | Not Available | Positive | 2269160 - 2270125 | 36070.7 |
| laci family transcriptional regulator | A7Q26_10385 | Not Available | Positive | 2270171 - 2271226 | 37542.9 |
| esterase | A7Q26_10390 | Not Available | Negative | 2271302 - 2272120 | 28528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

