Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | A7Q26_10185 | Not Available | Positive | 2219527 - 2220225 | 25407.8 |
| hypothetical protein | A7Q26_10190 | Not Available | Negative | 2220230 - 2221219 | 36995.3 |
| hypothetical protein | A7Q26_10195 | Not Available | Negative | 2221216 - 2222154 | 32572.0 |
| hypothetical protein | A7Q26_10200 | Not Available | Negative | 2222151 - 2222828 | 24415.4 |
| dna-binding protein | A7Q26_10210 | Not Available | Positive | 2223290 - 2223661 | 13929.4 |
| lipolytic enzyme | A7Q26_10215 | Not Available | Positive | 2223618 - 2224391 | 28086.5 |
| oligopeptide transporter, opt family | A7Q26_10220 | Not Available | Positive | 2224513 - 2226450 | 65351.5 |
| phosphoenolpyruvate carboxylase | A7Q26_10225 | Not Available | Negative | 2227318 - 2230020 | 97245.2 |
| atp-binding protein | A7Q26_10230 | Not Available | Positive | 2230195 - 2231646 | 51954.7 |
| phosphotyrosine protein phosphatase | A7Q26_10235 | Not Available | Positive | 2231643 - 2232116 | 16911.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

