Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | A7Q26_10130 | Not Available | Negative | 2206963 - 2208252 | 46193.1 |
| atp phosphoribosyltransferase regulatory subunit | A7Q26_10135 | Not Available | Negative | 2208388 - 2209524 | 40192.0 |
| phosphoglycerate dehydrogenase | A7Q26_10140 | Not Available | Negative | 2209622 - 2211202 | 55780.5 |
| phosphoserine aminotransferase | A7Q26_10145 | Not Available | Negative | 2211330 - 2212490 | 41351.2 |
| extensin | A7Q26_10150 | Not Available | Positive | 2212652 - 2213332 | 23902.8 |
| lysine decarboxylase | A7Q26_10155 | Not Available | Positive | 2213402 - 2214289 | 33290.9 |
| pyrimidine 5'-nucleotidase | A7Q26_10160 | Not Available | Positive | 2214462 - 2215127 | 24702.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A7Q26_10165 | Not Available | Positive | 2215131 - 2215970 | 29582.5 |
| glycosyl transferase | A7Q26_10170 | Not Available | Positive | 2216200 - 2217429 | 45517.9 |
| glycosyl transferase family 1 | A7Q26_10175 | Not Available | Positive | 2217422 - 2218564 | 41342.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

