Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-mercaptopyruvate sulfurtransferase | A7Q26_09880 | Not Available | Negative | 2159679 - 2160536 | 29845.4 |
| hypothetical protein | A7Q26_09885 | Not Available | Negative | 2160703 - 2162019 | 45378.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | A7Q26_09890 | Not Available | Positive | 2162108 - 2162581 | 17389.8 |
| aminopeptidase | A7Q26_09895 | Not Available | Positive | 2162836 - 2165487 | 93704.2 |
| gamma-glutamyltransferase | A7Q26_09900 | Not Available | Negative | 2165570 - 2167273 | 60326.1 |
| dihydroorotate dehydrogenase (quinone) | A7Q26_09905 | Not Available | Negative | 2167358 - 2168410 | 36609.4 |
| arac family transcriptional regulator | A7Q26_09910 | Not Available | Positive | 2168759 - 2169703 | 34342.3 |
| asnc family transcriptional regulator | A7Q26_09915 | Not Available | Positive | 2169821 - 2170264 | 15275.3 |
| fe-s cluster assembly protein sufb | A7Q26_09920 | Not Available | Positive | 2170261 - 2171745 | 54857.6 |
| hypothetical protein | A7Q26_09925 | Not Available | Positive | 2171786 - 2172241 | 16837.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

