Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | A7Q26_21455 | Not Available | Negative | 214183 - 214821 | 23416.3 |
| co-chaperone ybbn | A7Q26_21460 | Not Available | Negative | 214823 - 215734 | 32391.6 |
| hypothetical protein | A7Q26_21465 | Not Available | Negative | 215846 - 216265 | 14466.5 |
| sterol desaturase | A7Q26_21470 | Not Available | Negative | 216277 - 217005 | 27316.6 |
| prephenate dehydratase | A7Q26_21475 | Not Available | Negative | 217060 - 217950 | 32061.5 |
| cytochrome c | A7Q26_21480 | Not Available | Positive | 218125 - 218748 | 20705.1 |
| gnat family acetyltransferase | A7Q26_21485 | Not Available | Positive | 218782 - 219360 | 20961.7 |
| ai-2e family transporter | A7Q26_21490 | Not Available | Negative | 219383 - 220453 | 38339.3 |
| rna methyltransferase | A7Q26_21495 | Not Available | Positive | 220632 - 221432 | 29075.9 |
| mfs transporter | A7Q26_21500 | Not Available | Positive | 221555 - 222838 | 44791.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

