Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | A7Q26_09830 | Not Available | Positive | 2150142 - 2151020 | 32606.4 |
| diguanylate cyclase | A7Q26_09835 | Not Available | Positive | 2151091 - 2152248 | 42500.9 |
| glutathione s-transferase | A7Q26_09840 | Not Available | Negative | 2152269 - 2152940 | 25557.8 |
| acetate--coa ligase | A7Q26_09845 | Not Available | Positive | 2153125 - 2155068 | 70487.3 |
| cytochrome b | A7Q26_09850 | Not Available | Positive | 2155167 - 2155682 | 18927.8 |
| fe-s metabolism protein sufe | A7Q26_09855 | Not Available | Positive | 2155726 - 2156130 | 14574.4 |
| hypothetical protein | A7Q26_09860 | Not Available | Positive | 2156183 - 2156680 | 17513.0 |
| beta-carotene hydroxylase | A7Q26_09865 | Not Available | Negative | 2156649 - 2157170 | 19405.8 |
| mechanosensitive ion channel protein mscs | A7Q26_09870 | Not Available | Negative | 2157216 - 2158463 | 44322.2 |
| cystathionine beta-lyase | A7Q26_09875 | Not Available | Negative | 2158468 - 2159682 | 43864.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

