Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | A7Q26_09780 | Not Available | Positive | 2138684 - 2139574 | 31572.0 |
| hypothetical protein | A7Q26_09785 | Not Available | Positive | 2139765 - 2140253 | 18385.7 |
| cytochrome p450 | A7Q26_09790 | Not Available | Negative | 2140315 - 2141685 | 51490.4 |
| hypothetical protein | A7Q26_09795 | Not Available | Negative | 2141682 - 2142815 | 42374.7 |
| hypothetical protein | A7Q26_09800 | Not Available | Positive | 2142838 - 2143131 | 11462.8 |
| 3-deoxy-8-phosphooctulonate synthase | A7Q26_09805 | Not Available | Positive | 2143137 - 2143973 | 28712.7 |
| glutamate-5-semialdehyde dehydrogenase | A7Q26_09810 | Not Available | Negative | 2144001 - 2145266 | 43929.6 |
| helix-turn-helix transcriptional regulator | A7Q26_09815 | Not Available | Negative | 2145532 - 2146632 | 39950.6 |
| methyltransferase | A7Q26_09820 | Not Available | Negative | 2146742 - 2147389 | 24145.4 |
| aaa family atpase | A7Q26_09825 | Not Available | Negative | 2147520 - 2149805 | 83512.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

