Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | A7Q26_09680 | Not Available | Negative | 2115659 - 2117248 | 55517.0 |
| nicotinic acid mononucleotide adenylyltransferase | A7Q26_09685 | Not Available | Positive | 2117391 - 2118020 | 24053.4 |
| ribosome silencing factor | A7Q26_09690 | Not Available | Positive | 2118033 - 2118422 | 13880.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | A7Q26_09695 | Not Available | Positive | 2118466 - 2118888 | 15543.0 |
| metalloendopeptidase | A7Q26_09700 | Not Available | Positive | 2118940 - 2120175 | 43514.4 |
| peptidase s41 | A7Q26_09705 | Not Available | Positive | 2120280 - 2121632 | 48427.7 |
| disulfide bond formation protein | A7Q26_09710 | Not Available | Positive | 2121744 - 2122226 | 16497.5 |
| ubiquinone biosynthesis protein ubib | A7Q26_09715 | Not Available | Positive | 2122223 - 2122777 | 19671.5 |
| hypothetical protein | A7Q26_09720 | Not Available | Positive | 2122819 - 2123382 | 19815.2 |
| hypothetical protein | A7Q26_09725 | Not Available | Positive | 2123476 - 2123892 | 14801.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

