Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine biosynthesis protein | A7Q26_09630 | Not Available | Positive | 2105799 - 2106470 | 23734.9 |
| hypothetical protein | A7Q26_09635 | Not Available | Positive | 2106467 - 2106838 | 12618.4 |
| trna epoxyqueuosine(34) reductase queg | A7Q26_09640 | Not Available | Negative | 2107379 - 2108437 | 38232.8 |
| abc transporter atp-binding protein | A7Q26_09645 | Not Available | Positive | 2108460 - 2109449 | 35135.4 |
| abc transporter permease | A7Q26_09650 | Not Available | Positive | 2109446 - 2110636 | 42728.4 |
| peptide-methionine (r)-s-oxide reductase | A7Q26_09655 | Not Available | Positive | 2110656 - 2111132 | 17352.6 |
| hypothetical protein | A7Q26_09660 | Not Available | Negative | 2111119 - 2112879 | 62706.1 |
| polysaccharide biosynthesis protein gtra | A7Q26_09665 | Not Available | Negative | 2112908 - 2113330 | 14619.3 |
| fad-dependent oxidoreductase | A7Q26_09670 | Not Available | Negative | 2113335 - 2114858 | 57016.3 |
| urca family protein | A7Q26_09675 | Not Available | Negative | 2115094 - 2115426 | 11403.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

