Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | A7Q26_09525 | Not Available | Negative | 2085901 - 2086992 | 39558.4 |
| amino acid transporter | A7Q26_09535 | Not Available | Negative | 2087435 - 2088052 | 21991.7 |
| 50s ribosomal protein l20 | A7Q26_09540 | Not Available | Negative | 2088263 - 2088625 | 13509.7 |
| 50s ribosomal protein l35 | A7Q26_09545 | Not Available | Negative | 2088639 - 2088842 | 7533.3 |
| asma family protein | A7Q26_09550 | Not Available | Positive | 2089003 - 2091144 | 77754.1 |
| glyoxalase | A7Q26_09555 | Not Available | Positive | 2091200 - 2091613 | 14917.6 |
| histidinol phosphate phosphatase | A7Q26_09560 | Not Available | Negative | 2091677 - 2092501 | 29179.3 |
| glyoxalase | A7Q26_09565 | Not Available | Positive | 2092589 - 2093029 | 15658.3 |
| hypothetical protein | A7Q26_09570 | Not Available | Positive | 2093078 - 2093314 | 8368.86 |
| phosphoribosylpyrophosphate synthetase | A7Q26_09575 | Not Available | Negative | 2093415 - 2094350 | 33262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

