Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4440 domain-containing protein | A7Q26_09475 | Not Available | Positive | 2076201 - 2076590 | 13995.9 |
| hypothetical protein | A7Q26_09480 | Not Available | Negative | 2076600 - 2077301 | 25758.4 |
| hypothetical protein | A7Q26_09485 | Not Available | Negative | 2077452 - 2077838 | 14438.9 |
| nuclease | A7Q26_09490 | Not Available | Positive | 2077969 - 2078517 | 19864.9 |
| hypothetical protein | A7Q26_09495 | Not Available | Positive | 2078505 - 2078804 | 10520.6 |
| mfs transporter | A7Q26_09500 | Not Available | Positive | 2078845 - 2080131 | 44908.6 |
| peptide chain release factor 3 | A7Q26_09505 | Not Available | Negative | 2080203 - 2081780 | 58305.6 |
| aldose epimerase | A7Q26_09510 | Not Available | Negative | 2081825 - 2082721 | 32767.7 |
| hypothetical protein | A7Q26_09515 | Not Available | Positive | 2082858 - 2083397 | 18816.8 |
| phenylalanine--trna ligase subunit beta | A7Q26_09520 | Not Available | Negative | 2083487 - 2085904 | 84742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

