Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | A7Q26_09425 | Not Available | Positive | 2066695 - 2067312 | 23005.5 |
| lps export abc transporter periplasmic protein lptc | A7Q26_09430 | Not Available | Positive | 2067330 - 2067977 | 23542.2 |
| osta family protein | A7Q26_09435 | Not Available | Positive | 2067977 - 2068534 | 19224.9 |
| choline dehydrogenase | A7Q26_09440 | Not Available | Negative | 2068509 - 2070137 | 58518.1 |
| hypothetical protein | A7Q26_09445 | Not Available | Negative | 2070241 - 2070426 | 6604.87 |
| chemotaxis protein | A7Q26_09450 | Not Available | Negative | 2070498 - 2071790 | 44182.4 |
| polyphosphate kinase | A7Q26_09455 | Not Available | Negative | 2071905 - 2072696 | 30828.5 |
| aspartate--trna ligase | A7Q26_09460 | Not Available | Negative | 2072755 - 2074539 | 65625.4 |
| ribonuclease d | A7Q26_09465 | Not Available | Positive | 2074668 - 2075834 | 43227.9 |
| peptidase inhibitor i78 | A7Q26_09470 | Not Available | Positive | 2075846 - 2076157 | 10553.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

