Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | A7Q26_09375 | Not Available | Positive | 2055924 - 2056670 | 28034.2 |
| 30s ribosomal protein s13 | A7Q26_09380 | Not Available | Positive | 2056903 - 2057271 | 13640.8 |
| 30s ribosomal protein s11 | A7Q26_09385 | Not Available | Positive | 2057347 - 2057736 | 13964.7 |
| dna-directed rna polymerase subunit alpha | A7Q26_09390 | Not Available | Positive | 2057859 - 2058920 | 38253.0 |
| 50s ribosomal protein l17 | A7Q26_09395 | Not Available | Positive | 2059096 - 2059521 | 15583.7 |
| prolyl endopeptidase | A7Q26_09400 | Not Available | Positive | 2059626 - 2061791 | 79084.4 |
| hypothetical protein | A7Q26_09405 | Not Available | Positive | 2061846 - 2062904 | 38418.9 |
| permease | A7Q26_09410 | Not Available | Positive | 2062935 - 2063852 | 32472.8 |
| chemotaxis protein | A7Q26_09415 | Not Available | Positive | 2063951 - 2065312 | 48362.1 |
| cold-shock protein | A7Q26_09420 | Not Available | Negative | 2065566 - 2066414 | 28331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

