Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_21405 | Not Available | Negative | 204541 - 205344 | 28972.2 |
| luxr family transcriptional regulator | A7Q26_21410 | Not Available | Positive | 205629 - 206249 | 22887.0 |
| siroheme synthase | A7Q26_21415 | Not Available | Negative | 206235 - 206993 | 26234.7 |
| diaminopimelate decarboxylase | A7Q26_21420 | Not Available | Negative | 206993 - 208270 | 44978.1 |
| hypothetical protein | A7Q26_21425 | Not Available | Negative | 208287 - 208544 | 8972.82 |
| argininosuccinate lyase | A7Q26_21430 | Not Available | Negative | 208541 - 209911 | 49278.8 |
| thioredoxin | A7Q26_21435 | Not Available | Positive | 209955 - 210548 | 21075.1 |
| tonb-dependent receptor | A7Q26_21440 | Not Available | Positive | 210793 - 213444 | 94080.1 |
| enamine deaminase rida | A7Q26_21445 | Not Available | Positive | 213511 - 213954 | 15586.1 |
| hypothetical protein | A7Q26_21450 | Not Available | Negative | 213992 - 214186 | 6628.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

