Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_09025 | Not Available | Negative | 1988259 - 1989665 | 50137.9 |
| abc transporter substrate-binding protein | A7Q26_09030 | Not Available | Positive | 1989849 - 1991303 | 51585.5 |
| hypothetical protein | A7Q26_09035 | Not Available | Positive | 1991323 - 1991745 | 15506.0 |
| ribonuclease t | A7Q26_09040 | Not Available | Negative | 1991749 - 1992447 | 25884.4 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | A7Q26_09045 | Not Available | Negative | 1992449 - 1993297 | 29405.3 |
| prevent-host-death family protein | A7Q26_09050 | Not Available | Positive | 1993384 - 1993635 | 9191.01 |
| hypothetical protein | A7Q26_09055 | Not Available | Positive | 1993632 - 1994060 | 16266.6 |
| quinolinate synthase | A7Q26_09060 | Not Available | Negative | 1994067 - 1995053 | 35975.5 |
| hypothetical protein | A7Q26_09065 | Not Available | Negative | 1995098 - 1995817 | 26415.7 |
| mbl fold metallo-hydrolase | A7Q26_09070 | Not Available | Negative | 1995802 - 1996680 | 31239.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

