Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | A7Q26_08920 | Not Available | Positive | 1967923 - 1968936 | 36697.9 |
| hypothetical protein | A7Q26_08930 | Not Available | Positive | 1969408 - 1969635 | 7943.43 |
| metalloprotease tldd | A7Q26_08935 | Not Available | Positive | 1969680 - 1971122 | 50806.4 |
| hypothetical protein | A7Q26_08940 | Not Available | Positive | 1971177 - 1971752 | 21324.9 |
| transcriptional regulator | A7Q26_08945 | Not Available | Positive | 1971911 - 1972249 | 11914.5 |
| ammonia channel protein | A7Q26_08950 | Not Available | Positive | 1972263 - 1973699 | 49887.7 |
| phytoene synthase | A7Q26_08955 | Not Available | Negative | 1973830 - 1974780 | 34826.5 |
| rossman fold protein, tigr00730 family | A7Q26_08960 | Not Available | Negative | 1974834 - 1975415 | 20585.9 |
| phytoene dehydrogenase | A7Q26_08965 | Not Available | Negative | 1975415 - 1976902 | 54532.0 |
| lycopene cyclase | A7Q26_08970 | Not Available | Negative | 1976902 - 1978050 | 42578.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

