Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | A7Q26_08870 | Not Available | Negative | 1953498 - 1956161 | 96417.6 |
| hypothetical protein | A7Q26_08875 | Not Available | Positive | 1956570 - 1958597 | 74116.6 |
| fumarylacetoacetase | A7Q26_08880 | Not Available | Negative | 1958604 - 1959905 | 46386.1 |
| homogentisate 1,2-dioxygenase | A7Q26_08885 | Not Available | Negative | 1959902 - 1961206 | 47466.1 |
| 4-hydroxyphenylpyruvate dioxygenase | A7Q26_08890 | Not Available | Negative | 1961220 - 1962266 | 39348.3 |
| phenylalanine-4-hydroxylase | A7Q26_08895 | Not Available | Negative | 1962263 - 1963132 | 32821.7 |
| asnc family transcriptional regulator | A7Q26_08900 | Not Available | Positive | 1963228 - 1963701 | 17640.2 |
| lps export abc transporter atp-binding protein | A7Q26_08905 | Not Available | Positive | 1963857 - 1964642 | 28244.2 |
| rna polymerase sigma-54 factor | A7Q26_08910 | Not Available | Positive | 1964793 - 1966325 | 54075.6 |
| d-amino acid aminotransferase | A7Q26_08915 | Not Available | Positive | 1966839 - 1967690 | 29914.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

