Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilz | A7Q26_08715 | Not Available | Positive | 1927378 - 1927737 | 12927.6 |
| helicase | A7Q26_08720 | Not Available | Positive | 1927780 - 1930533 | 99019.5 |
| histidine phosphatase family protein | A7Q26_08725 | Not Available | Positive | 1930530 - 1931072 | 19929.8 |
| acetyltransferase | A7Q26_08730 | Not Available | Positive | 1931083 - 1931604 | 19011.9 |
| transcriptional regulator | A7Q26_08735 | Not Available | Negative | 1931611 - 1931949 | 12220.8 |
| integration host factor subunit alpha | A7Q26_08740 | Not Available | Negative | 1932038 - 1932328 | 10538.7 |
| 3-oxoacyl-acp synthase | A7Q26_08745 | Not Available | Negative | 1932420 - 1933388 | 33745.6 |
| phosphate acyltransferase | A7Q26_08750 | Not Available | Negative | 1933385 - 1934410 | 35793.1 |
| 50s ribosomal protein l32 | A7Q26_08755 | Not Available | Negative | 1934479 - 1934658 | 6567.88 |
| gst-like protein | A7Q26_08760 | Not Available | Positive | 1934879 - 1935310 | 15259.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

