Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | A7Q26_08665 | Not Available | Positive | 1916483 - 1917694 | 44093.0 |
| hypothetical protein | A7Q26_08670 | Not Available | Positive | 1917771 - 1918256 | 17522.9 |
| isoquinoline 1-oxidoreductase | A7Q26_08675 | Not Available | Positive | 1918253 - 1918807 | 19718.6 |
| dioxygenase | A7Q26_08680 | Not Available | Negative | 1918792 - 1919601 | 29262.7 |
| two-component system sensor histidine kinase/response regulator | A7Q26_08685 | Not Available | Negative | 1919673 - 1922240 | 92459.0 |
| heme oxygenase | A7Q26_08690 | Not Available | Negative | 1922233 - 1922718 | 16767.8 |
| atp-dependent rna helicase | A7Q26_08695 | Not Available | Positive | 1923015 - 1923941 | 37099.3 |
| 2og-fe(ii) oxygenase | A7Q26_08700 | Not Available | Positive | 1924051 - 1924725 | 25017.4 |
| hypothetical protein | A7Q26_08705 | Not Available | Positive | 1924991 - 1925461 | 18914.3 |
| lysine--trna ligase | A7Q26_08710 | Not Available | Negative | 1925666 - 1927246 | 58753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

