Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xshc-cox1-family protein | A7Q26_08515 | Not Available | Negative | 1886532 - 1887449 | 32107.6 |
| peptidase s24 | A7Q26_08520 | Not Available | Negative | 1887524 - 1888192 | 24458.4 |
| hypothetical protein | A7Q26_08525 | Not Available | Positive | 1888309 - 1888497 | 7554.3 |
| hypothetical protein | A7Q26_08530 | Not Available | Positive | 1888494 - 1888865 | 13375.0 |
| hypothetical protein | A7Q26_08535 | Not Available | Negative | 1888873 - 1889856 | 33807.5 |
| glycosyltransferase, exosortase a system-associated | A7Q26_08540 | Not Available | Negative | 1889914 - 1891140 | 44772.9 |
| putative o-glycosylation ligase, exosortase a system-associated | A7Q26_08545 | Not Available | Positive | 1891347 - 1892711 | 50596.9 |
| hypothetical protein | A7Q26_08550 | Not Available | Positive | 1892708 - 1893418 | 24843.5 |
| dna topoisomerase | A7Q26_08555 | Not Available | Positive | 1893476 - 1894483 | 37609.9 |
| mechanosensitive ion channel protein mscs | A7Q26_08560 | Not Available | Positive | 1894509 - 1895669 | 42139.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

