Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intradiol ring-cleavage dioxygenase | A7Q26_08310 | Not Available | Negative | 1842819 - 1843718 | 30936.9 |
| mfs transporter | A7Q26_08315 | Not Available | Negative | 1843815 - 1845050 | 42477.6 |
| gtp-binding protein typa | A7Q26_08320 | Not Available | Negative | 1845252 - 1847069 | 66515.5 |
| aminotransferase v | A7Q26_08325 | Not Available | Positive | 1847231 - 1848463 | 43940.9 |
| peptidase s10 | A7Q26_08330 | Not Available | Positive | 1848564 - 1850114 | 56791.6 |
| toxic anion resistance protein | A7Q26_08335 | Not Available | Positive | 1850210 - 1851439 | 44430.0 |
| hypothetical protein | A7Q26_08340 | Not Available | Positive | 1851543 - 1852253 | 25953.9 |
| ubiquinone biosynthesis methyltransferase ubie | A7Q26_08345 | Not Available | Negative | 1852424 - 1853152 | 26599.8 |
| peptide chain release factor 2 | A7Q26_08350 | Not Available | Negative | 1853152 - 1854279 | 41882.9 |
| hypothetical protein | A7Q26_08355 | Not Available | Positive | 1854555 - 1854959 | 14471.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

