Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | A7Q26_08145 | Not Available | Positive | 1815078 - 1815815 | 25430.3 |
| imidazole glycerol phosphate synthase subunit hisf | A7Q26_08150 | Not Available | Positive | 1815869 - 1816660 | 27102.3 |
| phosphoribosyl-atp diphosphatase | A7Q26_08155 | Not Available | Positive | 1816663 - 1816983 | 11531.7 |
| hypothetical protein | A7Q26_08160 | Not Available | Positive | 1817046 - 1817615 | 19532.2 |
| histone deacetylase | A7Q26_08165 | Not Available | Negative | 1817590 - 1818507 | 33102.3 |
| peptidoglycan-binding protein | A7Q26_08170 | Not Available | Positive | 1818565 - 1820016 | 52157.8 |
| hypothetical protein | A7Q26_08175 | Not Available | Positive | 1820024 - 1820335 | 10691.3 |
| twin-arginine translocation pathway signal protein | A7Q26_08180 | Not Available | Positive | 1820388 - 1821053 | 23748.3 |
| beta-glucosidase | A7Q26_08185 | Not Available | Negative | 1821067 - 1823349 | 81203.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | A7Q26_08200 | Not Available | Positive | 1823823 - 1824563 | 26502.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

