Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | A7Q26_08095 | Not Available | Positive | 1805418 - 1805915 | 18215.4 |
| glycosyl transferase family 1 | A7Q26_08100 | Not Available | Negative | 1806003 - 1807874 | 67956.2 |
| hypothetical protein | A7Q26_08105 | Not Available | Positive | 1808318 - 1808986 | 25002.2 |
| hypothetical protein | A7Q26_08110 | Not Available | Positive | 1809175 - 1810023 | 31279.4 |
| hypothetical protein | A7Q26_08115 | Not Available | Negative | 1810106 - 1810477 | 12832.6 |
| catalase/peroxidase hpi | A7Q26_08120 | Not Available | Negative | 1810548 - 1812764 | 79939.2 |
| hypothetical protein | A7Q26_08125 | Not Available | Negative | 1812944 - 1813420 | 17338.4 |
| imidazoleglycerol-phosphate dehydratase | A7Q26_08130 | Not Available | Positive | 1813507 - 1814094 | 21654.8 |
| gtp cyclohydrolase | A7Q26_08135 | Not Available | Positive | 1814122 - 1814409 | 10224.3 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | A7Q26_08140 | Not Available | Positive | 1814406 - 1815029 | 22130.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

