Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein gtra | A7Q26_07895 | Not Available | Positive | 1758851 - 1759270 | 15386.9 |
| formate dehydrogenase family accessory protein fdhd | A7Q26_07900 | Not Available | Negative | 1759337 - 1760128 | 27736.3 |
| formate dehydrogenase | A7Q26_07905 | Not Available | Negative | 1760137 - 1760370 | 8246.82 |
| formate dehydrogenase subunit alpha | A7Q26_07910 | Not Available | Negative | 1760381 - 1763242 | 103774.0 |
| formate dehydrogenase | A7Q26_07915 | Not Available | Negative | 1763239 - 1764813 | 54356.9 |
| nadh-quinone oxidoreductase subunit e | A7Q26_07920 | Not Available | Negative | 1764810 - 1765262 | 15909.2 |
| lysr family transcriptional regulator | A7Q26_07925 | Not Available | Negative | 1765373 - 1766275 | 32008.3 |
| molybdenum cofactor guanylyltransferase | A7Q26_07930 | Not Available | Positive | 1766336 - 1766872 | 18581.3 |
| uroporphyrinogen-iii c-methyltransferase | A7Q26_07935 | Not Available | Negative | 1766926 - 1767708 | 26709.4 |
| nitrate reductase | A7Q26_07940 | Not Available | Negative | 1767695 - 1770313 | 94418.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

