Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | A7Q26_07845 | Not Available | Negative | 1751276 - 1752199 | 33148.1 |
| arsr family transcriptional regulator | A7Q26_07850 | Not Available | Negative | 1752196 - 1753167 | 35676.0 |
| circumsporozoite protein | A7Q26_07855 | Not Available | Positive | 1753383 - 1753598 | 6678.57 |
| hypothetical protein | A7Q26_07860 | Not Available | Positive | 1753673 - 1753921 | 8260.82 |
| hypothetical protein | A7Q26_07865 | Not Available | Negative | 1753973 - 1754401 | 15369.1 |
| cobalamin abc transporter atp-binding protein | A7Q26_07870 | Not Available | Positive | 1754592 - 1755575 | 35724.3 |
| 50s ribosomal protein l28 | A7Q26_07875 | Not Available | Negative | 1755650 - 1755943 | 10727.0 |
| hypothetical protein | A7Q26_07880 | Not Available | Positive | 1756089 - 1756310 | 7768.72 |
| pp_01648 | A7Q26_07885 | Not Available | Positive | 1756487 - 1756945 | Not Available |
| hypothetical protein | A7Q26_07890 | Not Available | Negative | 1756907 - 1758805 | 68993.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

