Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | A7Q26_21250 | Not Available | Positive | 170571 - 171938 | 49950.9 |
| redox protein | A7Q26_21255 | Not Available | Positive | 171925 - 172146 | 7996.64 |
| histidine phosphotransferase | A7Q26_21260 | Not Available | Positive | 172236 - 172676 | 16112.3 |
| alkane 1-monooxygenase | A7Q26_21265 | Not Available | Positive | 172721 - 173734 | 35568.6 |
| succinyltransferase | A7Q26_21270 | Not Available | Negative | 173721 - 174803 | 39443.1 |
| atpase | A7Q26_21275 | Not Available | Positive | 175011 - 176666 | 60131.3 |
| mate family efflux transporter | A7Q26_21280 | Not Available | Negative | 176674 - 178125 | 50951.2 |
| valine--trna ligase | A7Q26_21285 | Not Available | Negative | 178219 - 180918 | 100922.0 |
| mfs transporter | A7Q26_21290 | Not Available | Negative | 180964 - 181650 | 24717.8 |
| adenosine deaminase | A7Q26_21295 | Not Available | Negative | 181720 - 182742 | 36971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

