Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_07740 | Not Available | Negative | 1729333 - 1729545 | 8184.22 |
| lipoprotein transmembrane | A7Q26_07750 | Not Available | Negative | 1730647 - 1731297 | 23482.8 |
| tryptophan--trna ligase | A7Q26_07755 | Not Available | Negative | 1731505 - 1732542 | 37679.2 |
| murein biosynthesis integral membrane protein murj | A7Q26_07760 | Not Available | Negative | 1732558 - 1734135 | 55798.5 |
| protein-export chaperone secb | A7Q26_07765 | Not Available | Negative | 1734274 - 1734780 | 18207.6 |
| preprotein translocase subunit tim44 | A7Q26_07770 | Not Available | Positive | 1734966 - 1735619 | 23635.1 |
| hypothetical protein | A7Q26_07775 | Not Available | Positive | 1735639 - 1736886 | 43441.9 |
| dna mismatch repair protein muts | A7Q26_07780 | Not Available | Positive | 1736897 - 1737427 | 19057.1 |
| response regulator pled | A7Q26_07785 | Not Available | Positive | 1737524 - 1739209 | 60883.6 |
| hypothetical protein | A7Q26_07790 | Not Available | Negative | 1739268 - 1740053 | 27991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

