Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_07690 | Not Available | Negative | 1715747 - 1717822 | 77340.7 |
| hypothetical protein | A7Q26_07695 | Not Available | Negative | 1719142 - 1719816 | 25404.5 |
| hypothetical protein | A7Q26_07700 | Not Available | Negative | 1720799 - 1721512 | 26358.0 |
| hypothetical protein | A7Q26_07705 | Not Available | Negative | 1721715 - 1722581 | 31136.8 |
| ti-type conjugative transfer relaxase traa | A7Q26_07710 | Not Available | Negative | 1722599 - 1725604 | 112109.0 |
| conjugal transfer protein trad | A7Q26_07715 | Not Available | Positive | 1725777 - 1726082 | 10347.4 |
| conjugal transfer protein trad | A7Q26_07720 | Not Available | Positive | 1726105 - 1726335 | 8567.25 |
| nucleotidyltransferase | A7Q26_07725 | Not Available | Negative | 1726332 - 1727846 | 57090.0 |
| hypothetical protein | A7Q26_07730 | Not Available | Negative | 1727843 - 1728457 | 23038.4 |
| hypothetical protein | A7Q26_07735 | Not Available | Positive | 1728693 - 1728872 | 6670.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

