Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_07490 | Not Available | Negative | 1672744 - 1673541 | 27661.6 |
| 3-hydroxyacyl-coa dehydrogenase | A7Q26_07495 | Not Available | Positive | 1673639 - 1674559 | 32629.1 |
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | A7Q26_07500 | Not Available | Positive | 1674565 - 1675401 | 30737.0 |
| 3-hydroxy-3-methylglutaryl coa synthase | A7Q26_07505 | Not Available | Positive | 1675398 - 1676846 | 51133.7 |
| acetyl-coa acetyltransferase | A7Q26_07510 | Not Available | Positive | 1676875 - 1678083 | 42317.5 |
| acyl-coa dehydrogenase | A7Q26_07515 | Not Available | Positive | 1678112 - 1679263 | 41910.4 |
| carnitine dehydratase | A7Q26_07520 | Not Available | Positive | 1679273 - 1680487 | 43000.7 |
| acyl-coa dehydrogenase | A7Q26_07525 | Not Available | Positive | 1680484 - 1682121 | 58051.3 |
| hypothetical protein | A7Q26_07530 | Not Available | Positive | 1682127 - 1682933 | 28723.1 |
| hypothetical protein | A7Q26_07535 | Not Available | Negative | 1682939 - 1683895 | 33765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

