Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | A7Q26_06925 | Not Available | Negative | 1551832 - 1552845 | 36530.6 |
| sugar transporter | A7Q26_06930 | Not Available | Negative | 1552900 - 1554216 | 47819.4 |
| lysr family transcriptional regulator | A7Q26_06935 | Not Available | Positive | 1554421 - 1555323 | 33468.5 |
| mfs transporter | A7Q26_06940 | Not Available | Positive | 1555476 - 1556828 | 46654.2 |
| shikimate dehydrogenase | A7Q26_06945 | Not Available | Positive | 1556857 - 1557753 | 31114.3 |
| porin | A7Q26_06950 | Not Available | Positive | 1557750 - 1559048 | 46957.8 |
| 3-keto-5-aminohexanoate cleavage protein | A7Q26_06955 | Not Available | Negative | 1559068 - 1560939 | 68096.8 |
| glycoside hydrolase | A7Q26_06960 | Not Available | Negative | 1561042 - 1562649 | 58819.8 |
| hypothetical protein | A7Q26_06965 | Not Available | Negative | 1562661 - 1563005 | 12340.6 |
| nad(p)-dependent oxidoreductase | A7Q26_06970 | Not Available | Negative | 1563005 - 1563760 | 25785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

