Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobg | A7Q26_06725 | Not Available | Negative | 1500862 - 1501932 | 37135.1 |
| cobaltochelatase subunit cobn | A7Q26_06730 | Not Available | Negative | 1501971 - 1505210 | 115031.0 |
| cobalamin biosynthesis protein cobw | A7Q26_06735 | Not Available | Negative | 1505220 - 1506257 | 36645.1 |
| nickel transporter | A7Q26_06740 | Not Available | Negative | 1506703 - 1507749 | 37542.5 |
| oxidoreductase | A7Q26_06745 | Not Available | Negative | 1508289 - 1509227 | 34410.0 |
| protocatechuate 3,4-dioxygenase | A7Q26_06750 | Not Available | Negative | 1509318 - 1510211 | 32833.3 |
| protocatechuate 4,5-dioxygenase subunit alpha | A7Q26_06755 | Not Available | Negative | 1510213 - 1510665 | 17329.5 |
| 4-oxalomesaconate hydratase | A7Q26_06760 | Not Available | Negative | 1510662 - 1511687 | 38060.7 |
| 6-phosphogluconate dehydrogenase | A7Q26_06765 | Not Available | Negative | 1511757 - 1512650 | 30529.7 |
| lysr family transcriptional regulator | A7Q26_06770 | Not Available | Negative | 1512716 - 1513867 | 41082.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

