Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | A7Q26_06625 | Not Available | Positive | 1483596 - 1484339 | 27149.9 |
| cytochrome c oxidase, cbb3-type subunit i | A7Q26_06630 | Not Available | Positive | 1484554 - 1486215 | 61928.4 |
| cytochrome c oxidase, cbb3-type subunit ii | A7Q26_06635 | Not Available | Positive | 1486230 - 1486979 | 28003.3 |
| cytochrome c oxidase cbb3 | A7Q26_06640 | Not Available | Positive | 1486976 - 1487146 | 6510.76 |
| cytochrome c oxidase, cbb3-type subunit iii | A7Q26_06645 | Not Available | Positive | 1487139 - 1488050 | 32732.5 |
| cytochrome c oxidase accessory protein ccog | A7Q26_06650 | Not Available | Positive | 1488198 - 1489625 | 52812.9 |
| hypothetical protein | A7Q26_06655 | Not Available | Positive | 1489629 - 1490084 | 16633.2 |
| nitrogen fixation protein fixi | A7Q26_06660 | Not Available | Positive | 1490084 - 1492216 | 74179.7 |
| cytochrome oxidase maturation protein, cbb3-type | A7Q26_06665 | Not Available | Positive | 1492213 - 1492359 | 5106.38 |
| 5,6-dimethylbenzimidazole synthase | A7Q26_06670 | Not Available | Negative | 1492384 - 1493031 | 24257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

