Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | A7Q26_06525 | Not Available | Positive | 1458103 - 1458888 | 27143.1 |
| hexuronate transporter | A7Q26_06530 | Not Available | Positive | 1458915 - 1460186 | 45845.3 |
| hypothetical protein | A7Q26_06535 | Not Available | Positive | 1460400 - 1460978 | 20842.2 |
| short-chain dehydrogenase | A7Q26_06540 | Not Available | Negative | 1460975 - 1461877 | 32242.4 |
| mfs transporter | A7Q26_06545 | Not Available | Positive | 1462011 - 1463435 | 50437.3 |
| hypothetical protein | A7Q26_06550 | Not Available | Positive | 1463473 - 1464231 | 29243.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | A7Q26_06555 | Not Available | Positive | 1464236 - 1465663 | 50010.2 |
| amidohydrolase | A7Q26_06560 | Not Available | Positive | 1465667 - 1466722 | 39254.0 |
| mfs transporter | A7Q26_06565 | Not Available | Positive | 1466719 - 1468326 | 56862.8 |
| lignostilbene alpha-beta-dioxygenase | A7Q26_06570 | Not Available | Negative | 1468330 - 1469799 | 54931.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

