Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | A7Q26_06300 | Not Available | Negative | 1400744 - 1402249 | 55332.9 |
| phyllosphere-induced regulator phyr | A7Q26_06305 | Not Available | Positive | 1402849 - 1403640 | 28663.3 |
| rna polymerase subunit sigma-70 | A7Q26_06310 | Not Available | Positive | 1403969 - 1404604 | 23504.7 |
| hypothetical protein | A7Q26_06315 | Not Available | Positive | 1404655 - 1404915 | 9283.9 |
| sugar transferase | A7Q26_06320 | Not Available | Positive | 1405081 - 1406469 | 52057.3 |
| histidine kinase | A7Q26_06325 | Not Available | Positive | 1406480 - 1408543 | 76076.0 |
| pep-cterm-box response regulator transcription factor | A7Q26_06330 | Not Available | Positive | 1408543 - 1409907 | 49939.2 |
| hypothetical protein | A7Q26_06335 | Not Available | Positive | 1409911 - 1411950 | 70083.3 |
| gntr family transcriptional regulator | A7Q26_06340 | Not Available | Negative | 1411954 - 1412298 | 12517.1 |
| nitroreductase | A7Q26_06345 | Not Available | Negative | 1412370 - 1412948 | 20881.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

