Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase | A7Q26_06250 | Not Available | Positive | 1383098 - 1384558 | 51536.8 |
| beta-galactosidase | A7Q26_06255 | Not Available | Positive | 1384575 - 1387256 | 97773.4 |
| tonb-dependent receptor | A7Q26_06260 | Not Available | Positive | 1387396 - 1390260 | 102090.0 |
| gdsl family lipase | A7Q26_06265 | Not Available | Positive | 1390649 - 1391875 | 43651.0 |
| arsr family transcriptional regulator | A7Q26_06270 | Not Available | Negative | 1391859 - 1392350 | 18152.1 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | A7Q26_06275 | Not Available | Positive | 1392450 - 1396052 | 127486.0 |
| histidine kinase | A7Q26_06280 | Not Available | Positive | 1396189 - 1398171 | 72176.2 |
| enoyl-coa hydratase | A7Q26_06285 | Not Available | Negative | 1398191 - 1399141 | 35299.6 |
| hypothetical protein | A7Q26_06290 | Not Available | Positive | 1399381 - 1399560 | 6621.06 |
| trna guanosine(34) transglycosylase tgt | A7Q26_06295 | Not Available | Positive | 1399610 - 1400740 | 41360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

