Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | A7Q26_06150 | Not Available | Positive | 1359147 - 1360541 | 48919.9 |
| hypothetical protein | A7Q26_06155 | Not Available | Positive | 1360718 - 1361371 | 23217.8 |
| thioesterase | A7Q26_06160 | Not Available | Positive | 1361542 - 1361961 | 15797.8 |
| orotidine 5'-phosphate decarboxylase | A7Q26_06165 | Not Available | Negative | 1362009 - 1362683 | 23351.3 |
| hypothetical protein | A7Q26_06170 | Not Available | Negative | 1362680 - 1363030 | 12536.6 |
| epimerase | A7Q26_06175 | Not Available | Negative | 1363064 - 1363810 | 26744.4 |
| mfs transporter | A7Q26_06180 | Not Available | Negative | 1363951 - 1365363 | 49184.8 |
| gluconolaconase | A7Q26_06185 | Not Available | Negative | 1365385 - 1366275 | 31615.3 |
| 3-oxoacyl-acp reductase | A7Q26_06190 | Not Available | Negative | 1366277 - 1367032 | 27065.4 |
| fumarylacetoacetate hydrolase | A7Q26_06195 | Not Available | Negative | 1367029 - 1368162 | 39636.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

