Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | A7Q26_05395 | Not Available | Positive | 1209474 - 1209989 | 18432.4 |
| peptidase | A7Q26_05400 | Not Available | Negative | 1210091 - 1210696 | 22272.9 |
| conjugal transfer protein trbc | A7Q26_05405 | Not Available | Negative | 1210668 - 1211549 | 31183.5 |
| conjugal transfer protein tran | A7Q26_05410 | Not Available | Negative | 1211521 - 1212645 | 39481.1 |
| hypothetical protein | A7Q26_05415 | Not Available | Negative | 1212642 - 1214498 | 65112.4 |
| conjugal transfer protein | A7Q26_05420 | Not Available | Negative | 1214750 - 1215766 | 36060.1 |
| conjugal transfer protein traw | A7Q26_05425 | Not Available | Negative | 1215763 - 1216455 | 24612.9 |
| hypothetical protein | A7Q26_05430 | Not Available | Negative | 1216445 - 1216678 | 8141.02 |
| hypothetical protein | A7Q26_05435 | Not Available | Negative | 1216675 - 1217001 | 12086.2 |
| conjugal transfer protein | A7Q26_05440 | Not Available | Negative | 1217007 - 1219505 | 92072.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

