Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization protein | A7Q26_05345 | Not Available | Negative | 1199694 - 1200146 | 16750.9 |
| prevent-host-death protein | A7Q26_05350 | Not Available | Negative | 1200143 - 1200439 | 10792.0 |
| hypothetical protein | A7Q26_05355 | Not Available | Negative | 1200561 - 1201121 | 20441.4 |
| hypothetical protein | A7Q26_05360 | Not Available | Negative | 1201128 - 1201766 | 22827.3 |
| hypothetical protein | A7Q26_05365 | Not Available | Positive | 1201881 - 1202357 | 17938.4 |
| dna transfer protein | A7Q26_05370 | Not Available | Negative | 1202354 - 1206121 | 132161.0 |
| conjugal transfer protein trah | A7Q26_05375 | Not Available | Negative | 1206134 - 1207558 | 52100.7 |
| hypothetical protein | A7Q26_05380 | Not Available | Negative | 1207612 - 1208187 | 20408.1 |
| thiol reductase thioredoxin | A7Q26_05385 | Not Available | Negative | 1208187 - 1209095 | 33263.1 |
| antitoxin | A7Q26_05390 | Not Available | Positive | 1209150 - 1209452 | 11220.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

