Campylobacter ornithocola strain WBE38

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter ornithocola strain WBE38 is a Gram-negative bacterium characterized by its rod shape and microaerophilic oxygen requirement. This strain does not form spores and possesses a single replicon, indicating a simplified genetic structure compared to some other bacterial species. The genomic sequence of strain WBE38 is cataloged under the accession LXSU00000000.1, providing a basis for further genomic analysis and research. As a microaerophile, Campylobacter ornithocola strain WBE38 thrives in environments with reduced oxygen levels, which is typical for many members of the Campylobacter genus. These conditions are often found in the gastrointestinal tracts of birds, suggesting a potential ecological niche for this bacterium in avian species. Understanding the traits of C. ornithocola, particularly its growth requirements and genetic makeup, can provide insights into its role in avian microbiomes and its interactions with host organisms. The non-spore-forming nature of strain WBE38 implies that it may be susceptible to environmental stresses that can affect survival outside of a host. This trait is significant for understanding its ecological distribution and potential pathogenicity. The specific adaptations of Campylobacter ornithocola, coupled with its genetic information, could facilitate future studies on its ecological roles and interactions within bird populations.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter ornithocola
Strainstrain WBE38

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter ornithocola strain WBE38
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter ornithocola strain WBE38 NODE_9, whole genome

Gene Summary

Adenine Count

587979 bp

Thymine Count

587309 bp

Guanine Count

241257 bp

Cytosine Count

251955 bp

Genome Length

1668500 bp

Protein-coding Genes

1610 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytolethal distending toxin subunit cdtbA7X81_06330Not AvailableNegative1068942 - 106974829548.8
cytolethal distending toxin subunit aA7X81_06335Not AvailableNegative1069757 - 107055730186.4
peptidase tA7X81_06340Not AvailablePositive1070721 - 107194746096.3
c4-dicarboxylate abc transporterA7X81_06345Not AvailableNegative1071972 - 107326445511.8
dipeptidase eA7X81_06350Not AvailableNegative1073274 - 107397826619.2
5'/3'-nucleotidase sureA7X81_06355Not AvailablePositive1074098 - 107487129013.4
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaA7X81_06360Not AvailablePositive1074864 - 107551724231.2
acetyltransferaseA7X81_06365Not AvailablePositive1075501 - 107595017504.2
class d beta-lactamaseA7X81_06370Not AvailablePositive1075947 - 107671429754.0
hypothetical proteinA7X81_06375Not AvailableNegative1076688 - 107739827813.9

Displaying genes 1061 – 1070 of 1658 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.