Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | A6U97_22585 | Not Available | Negative | 5766633 - 5767553 | 33607.4 |
| catalase/peroxidase hpi | A6U97_22590 | Not Available | Positive | 5767770 - 5769941 | 78693.2 |
| hypothetical protein | A6U97_22595 | Not Available | Negative | 5769998 - 5770174 | 6213.1 |
| arac family transcriptional regulator | A6U97_22600 | Not Available | Positive | 5770437 - 5771312 | 32223.7 |
| ligand-gated channel | A6U97_22605 | Not Available | Negative | 5771444 - 5773564 | 77169.0 |
| abc transporter substrate-binding protein | A6U97_22610 | Not Available | Positive | 5773787 - 5774797 | 35649.8 |
| iron abc transporter permease | A6U97_22615 | Not Available | Positive | 5774794 - 5775837 | 35038.9 |
| abc transporter permease | A6U97_22620 | Not Available | Positive | 5775840 - 5776874 | 35606.9 |
| iron dicitrate abc transporter atp-binding protein | A6U97_22625 | Not Available | Positive | 5776871 - 5777683 | 29505.8 |
| marr family transcriptional regulator | A6U97_22630 | Not Available | Negative | 5777689 - 5778036 | 13363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


