Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | A6U97_22135 | Not Available | Negative | 5660115 - 5660558 | 16072.1 |
| shikimate dehydrogenase | A6U97_22140 | Not Available | Negative | 5660555 - 5661424 | 31237.6 |
| glutamine abc transporter atp-binding protein | A6U97_22145 | Not Available | Negative | 5661501 - 5662262 | 27953.0 |
| abc transporter substrate-binding protein | A6U97_22150 | Not Available | Negative | 5662292 - 5663131 | 29923.7 |
| abc transporter substrate-binding protein | A6U97_22155 | Not Available | Negative | 5663166 - 5664002 | 29636.4 |
| amino acid abc transporter permease | A6U97_22160 | Not Available | Negative | 5664046 - 5664696 | 23078.8 |
| abc transporter permease | A6U97_22165 | Not Available | Negative | 5664707 - 5665375 | 24083.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | A6U97_22170 | Not Available | Negative | 5665744 - 5666805 | 37311.6 |
| protocatechuate 3,4-dioxygenase subunit alpha | A6U97_22175 | Not Available | Negative | 5666824 - 5667444 | 22864.0 |
| protocatechuate 3,4-dioxygenase subunit beta | A6U97_22180 | Not Available | Negative | 5667447 - 5668187 | 27995.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


