Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | A6U97_21235 | Not Available | Positive | 5456918 - 5459878 | 106734.0 |
| sarcosine oxidase subunit gamma | A6U97_21240 | Not Available | Positive | 5459871 - 5460425 | 19250.9 |
| hypothetical protein | A6U97_21245 | Not Available | Negative | 5460422 - 5461462 | 38005.1 |
| branched-chain amino acid abc transporter substrate-binding protein | A6U97_21250 | Not Available | Negative | 5461491 - 5462114 | 22797.1 |
| nodulation protein n | A6U97_21255 | Not Available | Negative | 5462250 - 5462738 | 17976.4 |
| glycogen debranching enzyme glgx | A6U97_21260 | Not Available | Negative | 5462793 - 5464748 | 71497.0 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | A6U97_21265 | Not Available | Negative | 5464882 - 5466510 | 57816.6 |
| starch synthase | A6U97_21270 | Not Available | Negative | 5466515 - 5467957 | 51898.3 |
| glucose-1-phosphate adenylyltransferase | A6U97_21275 | Not Available | Negative | 5467963 - 5469225 | 47039.8 |
| 1,4-alpha-glucan branching enzyme | A6U97_21280 | Not Available | Negative | 5469248 - 5471455 | 83378.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


