Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | A6U97_18680 | Not Available | Negative | 4888635 - 4889114 | 17365.9 |
| 4a-hydroxytetrahydrobiopterin dehydratase | A6U97_18685 | Not Available | Positive | 4889195 - 4889500 | 11357.5 |
| hypothetical protein | A6U97_18690 | Not Available | Positive | 4889552 - 4889932 | 13999.2 |
| hypothetical protein | A6U97_18695 | Not Available | Positive | 4890231 - 4890734 | 17793.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase | A6U97_18700 | Not Available | Positive | 4890935 - 4892173 | 45733.5 |
| abc transporter permease | A6U97_18705 | Not Available | Positive | 4892282 - 4893235 | 32444.0 |
| abc transporter permease | A6U97_18710 | Not Available | Positive | 4893331 - 4894212 | 30288.1 |
| abc transporter atp-binding protein | A6U97_18715 | Not Available | Positive | 4894209 - 4895003 | 28360.6 |
| threonine transporter rhtb | A6U97_18720 | Not Available | Negative | 4895049 - 4895696 | 23143.2 |
| short-chain dehydrogenase | A6U97_18725 | Not Available | Negative | 4895848 - 4896702 | 30274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


