Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | A6U97_17525 | Not Available | Negative | 4622999 - 4623832 | 29468.1 |
| laci family transcriptional regulator | A6U97_17530 | Not Available | Positive | 4624058 - 4625125 | 38405.9 |
| plasmid partitioning protein repa | A6U97_17535 | Not Available | Positive | 4625545 - 4626828 | 47507.2 |
| plasmid partitioning protein repb | A6U97_17540 | Not Available | Positive | 4626825 - 4627850 | 37367.4 |
| replication initiation protein repc | A6U97_17545 | Not Available | Positive | 4628053 - 4629267 | 44567.3 |
| carnitine dehydratase | A6U97_17550 | Not Available | Negative | 4629908 - 4632421 | 91660.6 |
| choline dehydrogenase | A6U97_17555 | Not Available | Negative | 4632446 - 4634134 | 61363.8 |
| lysr family transcriptional regulator | A6U97_17560 | Not Available | Positive | 4634295 - 4635224 | 33475.5 |
| transcriptional regulator | A6U97_17565 | Not Available | Negative | 4635281 - 4636165 | 32524.0 |
| glyoxalase | A6U97_17570 | Not Available | Positive | 4636283 - 4636744 | 17111.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


