Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | A6U97_16720 | Not Available | Negative | 4445334 - 4446803 | 51699.4 |
| transketolase | A6U97_16725 | Not Available | Negative | 4446919 - 4447875 | 33131.1 |
| transketolase | A6U97_16730 | Not Available | Negative | 4447875 - 4448684 | 29811.6 |
| sugar abc transporter permease | A6U97_16735 | Not Available | Positive | 4449122 - 4450102 | 33849.0 |
| sugar abc transporter substrate-binding protein | A6U97_16740 | Not Available | Positive | 4450235 - 4451164 | 32089.6 |
| sugar abc transporter | A6U97_16745 | Not Available | Positive | 4451285 - 4452763 | 52930.5 |
| short-chain dehydrogenase | A6U97_16750 | Not Available | Positive | 4452778 - 4453566 | 27622.4 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | A6U97_16755 | Not Available | Negative | 4453688 - 4454329 | 22947.6 |
| hybrid sensor histidine kinase/response regulator | A6U97_16760 | Not Available | Negative | 4454747 - 4456852 | 76183.8 |
| circadian clock protein kaic | A6U97_16765 | Not Available | Negative | 4456794 - 4458302 | 55663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


