Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | A6U97_13555 | Not Available | Positive | 3726760 - 3727176 | 14860.8 |
| d-amino acid aminotransferase | A6U97_13560 | Not Available | Positive | 3727173 - 3727748 | 21291.4 |
| fatty acid desaturase | A6U97_13565 | Not Available | Negative | 3727796 - 3728827 | 38723.6 |
| tetr family transcriptional regulator | A6U97_13570 | Not Available | Negative | 3729426 - 3730040 | 23506.8 |
| efflux transporter periplasmic adaptor subunit | A6U97_13575 | Not Available | Positive | 3730349 - 3731425 | 38312.6 |
| efflux transporter periplasmic adaptor subunit | A6U97_13580 | Not Available | Positive | 3731425 - 3732510 | 38351.6 |
| acr family transporter | A6U97_13585 | Not Available | Positive | 3732507 - 3735578 | 112172.0 |
| gntr family transcriptional regulator | A6U97_13590 | Not Available | Positive | 3735796 - 3736512 | 26106.2 |
| aspartate ammonia-lyase | A6U97_13595 | Not Available | Negative | 3736481 - 3737893 | 50033.2 |
| l-asparagine permease | A6U97_13600 | Not Available | Positive | 3738182 - 3739639 | 52218.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


