Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | A6U97_23860 | Not Available | Negative | 1994817 - 1995881 | 39052.6 |
| nad/nadp octopine/nopaline dehydrogenase | A6U97_23865 | Not Available | Negative | 1995929 - 1997011 | 38798.6 |
| arginase | A6U97_23870 | Not Available | Negative | 1997087 - 1998010 | 32861.2 |
| d-nopaline dehydrogenase | A6U97_23875 | Not Available | Negative | 1998091 - 1999509 | 50367.8 |
| (2fe-2s)-binding protein | A6U97_23880 | Not Available | Negative | 1999506 - 1999799 | 10851.2 |
| d-nopaline dehydrogenase | A6U97_23885 | Not Available | Negative | 1999796 - 2000914 | 40198.5 |
| hydantoinase | A6U97_23890 | Not Available | Positive | 2001524 - 2003560 | 72712.4 |
| methylhydantoinase | A6U97_23895 | Not Available | Positive | 2003564 - 2005519 | 71047.6 |
| lysr family transcriptional regulator | A6U97_23900 | Not Available | Negative | 2005638 - 2006558 | 33732.4 |
| abc transporter permease | A6U97_23905 | Not Available | Negative | 2006673 - 2007398 | 26374.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


