Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 15-174 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1248104 bp
Thymine Count
1277733 bp
Guanine Count
1783922 bp
Cytosine Count
1744943 bp
Genome Length
6054965 bp
Protein-coding Genes
5419 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | A6U97_08670 | Not Available | Negative | 1721411 - 1721713 | 11295.3 |
| clp protease | A6U97_08675 | Not Available | Negative | 1721740 - 1722693 | 34789.2 |
| lps export abc transporter periplasmic protein lptc | A6U97_08680 | Not Available | Positive | 1722943 - 1723608 | 23895.8 |
| hypothetical protein | A6U97_08685 | Not Available | Positive | 1723622 - 1724188 | 20000.9 |
| lps export abc transporter atp-binding protein | A6U97_08690 | Not Available | Positive | 1724222 - 1725007 | 28536.4 |
| rna polymerase sigma-54 factor | A6U97_08695 | Not Available | Positive | 1725161 - 1726711 | 57086.4 |
| ribosomal subunit interface protein | A6U97_08700 | Not Available | Positive | 1726946 - 1727527 | 21326.1 |
| pts iia-like nitrogen-regulatory protein ptsn | A6U97_08705 | Not Available | Positive | 1727610 - 1728071 | 16413.8 |
| nucleotide exchange factor grpe | A6U97_08710 | Not Available | Negative | 1728201 - 1728836 | 22920.0 |
| heat-inducible transcriptional repressor hrca | A6U97_08715 | Not Available | Negative | 1728950 - 1730041 | 39811.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


