Pseudomonas sp. 21C1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 21C1 is characterized by having a single replicon, which indicates a streamlined genomic structure that can contribute to its adaptability and efficiency in various environments. The genomic sequence of this strain is accessible under the accession number LXJR00000000.1. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, which may include soil, water, and plant surfaces. This versatility often enables them to play significant roles in biogeochemical cycles and in the degradation of pollutants, suggesting an ecological importance in maintaining environmental health and sustainability. The presence of a single replicon in Pseudomonas sp. 21C1 may suggest a level of genomic simplicity that can facilitate rapid growth and adaptation to changing environmental conditions. This adaptability is a hallmark of many Pseudomonas species, which are often employed in bioremediation efforts due to their capacity to degrade various organic compounds. In summary, Pseudomonas sp. 21C1, with its single replicon and genomic accessibility, exemplifies the ecological and biological significance of Pseudomonas species in environmental contexts. Its traits highlight the potential for contributing to ecological balance and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 21C1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 21C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 21C1 contig00110, whole genome shotgun sequence.

Gene Summary

Adenine Count

1041498 bp

Thymine Count

989555 bp

Guanine Count

1611330 bp

Cytosine Count

1699839 bp

Genome Length

5342222 bp

Protein-coding Genes

4603 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining proteinA7D25_08845Not AvailableNegative1915894 - 191693137009.8
asparaginyl/glutamyl-trna amidotransferase subunit cA7D25_08850Not AvailablePositive1917185 - 191747210419.4
aspartyl/glutamyl-trna amidotransferase subunit aA7D25_08855Not AvailablePositive1917488 - 191893951398.4
aspartyl/glutamyl-trna amidotransferase subunit bA7D25_08860Not AvailablePositive1918952 - 192040052890.1
hypothetical proteinA7D25_08865Not AvailablePositive1920474 - 192084513502.2
sodium:calcium antiporterA7D25_08870Not AvailablePositive1920879 - 192197337893.2
malate transporterA7D25_08875Not AvailableNegative1921970 - 192291133627.1
two-component system response regulatorA7D25_08880Not AvailableNegative1923053 - 192361920847.1
histidine kinaseA7D25_08885Not AvailableNegative1923622 - 192487546168.4
hypothetical proteinA7D25_08890Not AvailablePositive1925176 - 192588325187.1

Displaying genes 1821 – 1830 of 4709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.